TRIzol (Invitrogen) was used to extract total RNA from HCC tissues and cells following the manufacturer’s procedure. All miRNAs were reverse transcribed into cDNA with the miDETECT A Track miRNA qRT-PCR Starter Kit (C10712–1, RiboBio, Guangzhou, China). All lncRNAs and mRNAs were reverse transcribed into cDNA with the RevertAid First Strand cDNA Synthesis Kit (Thermo-Fisher Scientific). All primers used in this study were customized from RiboBio, and the sequence of primers are listed in Additional File 1: Table S1.

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