KE
Keisuke Ekino
  • Sojo University Kumamoto City
PCR-mediated One-day Synthesis of Guide RNA for the CRISPR/Cas9 System
CRISPR/Cas9系统的PCR介导的一日合成向导RNA
作者:Naim Hassan, Farhana Easmin, Keisuke Ekino and Satoshi Harashima日期:07/05/2021,浏览量:3514,Q&A: 0

Nowadays, CRISPR (clustered regularly interspaced short palindromic repeats) and the CRISPR-associated protein (Cas9) system play a major role in genome editing. To target the desired sequence of the genome successfully, guide RNA (gRNA) is indispensable for the CRISPR/Cas9 system. To express gRNA, a plasmid expressing the gRNA sequence is typically constructed; however, construction of plasmids involves much time and labor. In this study, we propose a novel procedure to express gRNA via a much simpler method that we call gRNA-TES (gRNA-transient expression system). This method employs only PCR, and all the steps including PCR and yeast transformation can be completed within 1 day. In comparison with the plasmid-based gRNA delivery system, the performance of gRNA-TES is more effective, and its total time and cost are significantly reduced.

Determination of D-galactofuranose Content of Galactomannoproteins in Aspergillus nidulans
构巢曲霉中半乳甘露糖蛋白的D-呋喃半乳糖含量测定
作者:Takuji Oka, Yukako Katafuchi, Kohsai Fukuda, Keisuke Ekino, Masatoshi Goto and Yoshiyuki Nomura日期:09/05/2014,浏览量:7799,Q&A: 0
Galactofuranose (Galf) is a component of several polysaccharides and glycoconjugates in certain species of filamentous fungi. Galf residues are frequently found in Aspergillus glycoproteins, including N-glycans and O-mannose glycans that modify many cell wall proteins and extracellular enzymes. It is known that furanoses, contained in oligosaccharides, are detected as pyranoses after hydrolysis, and that D-galactopyranose is not contained in the galactomannoproteins of Aspergillus spp. To determine the levels of D-galactofuranose in galactomannoproteins extracted from Aspergillus nidulans (A. nidulans), we measured the amount of D-galactopyranose production after galactomannoproteins hydrolysis. The method described in this manuscript allows determination of the D-galactofuranose content of galactomannoproteins in Aspergillus spp.
Purification of the GfsA-3x FLAG Protein Expressed in Aspergillus nidulans
构巢曲霉中表达的GfsA-3xFLAG 蛋白的纯化
作者:Takuji Oka, Yukako Katafuchi, Kohsai Fukuda, Keisuke Ekino, Masatoshi Goto and Yoshiyuki Nomura日期:09/05/2014,浏览量:8725,Q&A: 0
GfsA is a fungal β-galactofuranosyltransferase involved in the biosynthesis of O-glycan. To investigate the enzymatic functions of GfsA, we attempted to obtain a recombinant protein of this enzyme from two heterologous host organisms. However, GfsA could not be expressed as a recombinant protein in either Escherichia coli (E. coli) or Saccharomyces cerevisiae (S. cerevisiae). Therefore, we decided to employ Aspergillus nidulans (A. nidulans) as the host organism, and produced a strain that expressed 3x FLAG-tagged GfsA using chromosomal tagging. To confirm its expression, a solubilized protein was prepared from the tagged strain and analyzed with an anti-FLAG antibody. The strain that expressed 3x FLAG-tagged GfsA produced a functional protein with a mass of approximately 67 kDa. The method described in this manuscript allows purification of the GfsA-3xFLAG protein as expressed in A. nidulans cells.